Single Cell OmixAtlas
Explore the world’s largest single cell database, meticulously curated and ready for analysis.
Explore the world’s largest single cell database, meticulously curated and ready for analysis.
Polly's single cell studies are engineered to a consistent H5AD format that comprises cell annotations, expression values and associated metadata from publications.
Access ~1700 curated single cell datasets that reliably capture cell annotations and expression values from publication. Polly's curation ensures cell annotations are standardized with consistent ontologies across studies and expression values are reproducible.
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Identify relevant single cell studies by searching curated fields like source, treatment protocol, and disease on an intuitive UI or with SQL. Find similar expression profiles or examine categorical metadata within minutes using integrations with tools like Cell by Gene.
Export data to your existing analytical set up using API based integrations. Datasets from the Single Cell OmixAtlas have been engineered to a consistent H5AD format that is compatible with commonly used single cell pipelines or applications.
Explore the Bulk RNA-Seq OmixAtlas using built in filters or free-text search
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Use integration with phantasus to visualize gene expression profiles from the bulk RNA-Seq OmixAtlas
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Shortlist relevant datasets and transfer to an OmixAtlas you define
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Request additional curation to unlock diverse analytical options
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