Bulk RNA-Seq OmixAtlas
A comprehensive look at the world's largest curated gene expression data.
A comprehensive look at the world's largest curated gene expression data.
Access ~42,000 bulk RNA-Seq datasets from GEO, processed consistently with Kallisto and engineered to a standard GCT format.
Find relevant data, samples and associated metadata within minutes using an intuitive UI or SQL. Polly's curation models annotate Bulk RNA-Seq datasets with over 21 harmonised metadata at human levels of accuracy.
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Combine consistently processed Bulk RNA-Seq studies (identifier mapping, alignment, normalization, quality check) to perform large scale meta-analysis, compare cohorts reliably and generate high confidence hypotheses.
Export data to your existing analytical set up using API based integrations. Datasets from the Bulk RNA-Seq OmixAtlas have been engineered to a consistent tabular schema that is compatible with any tool or pipeline.
Find datasets 9X faster on Polly’s single source of truth for data - OmixAtlases
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Use integration with phantasus to visualize gene expression profiles from the bulk RNA-Seq OmixAtlas
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Shortlist relevant datasets and transfer to an OmixAtlas you define
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Request additional curation to unlock diverse analytical options
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