Unlock AI-Ready Insights from Biomedical Data with Polly Xtract

Extract structured metadata from messy sources - PDFs, images, free text, tables, and more

Handle any number of metadata fields, from study design to sample attributes, with ontology-mapped outputs

Automate what used to take weeks - Polly Xtract delivers 4× faster curation with zero missing fields

Outperforms GPT-4 and even manual curators in accuracy, F1 score, and consistency

Outputs come with field-level evidence, confidence scores, and explainable reasoning logs

Already powering real-world workflows - from GEO harmonization to clinical trial parsing and EMR digitization

Schema-flexible by design - works with both standard models (like CellxGene) and your internal data formats

Enable R&D by Harnessing ML’s Potential for Biological Data

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Join 100s of Scientists In Using Polly to Fast-track R&D.

What Our Business Partners Have to Say

Data processing and scientific reporting of metabolomics data are crucial but also tedious. Polly’s range of applications helped our team in accelerating these processes significantly and effectively

Dewakar Sangaraju,
Senior Scientist; Genentech

Extremely impressed by Polly and its power to digest and integrate large datasets. The unique partnership that we have allows us to work hand-in-hand with software engineers and scientists to rapidly develop novel hypotheses that we can test in the lab...

Dr. Kate Yen,
Founder & CEO @Auron Therapeutics

Data analysis is the biggest bottleneck for metabolomics research. Elucidata has worked directly with us to streamline our analysis pipeline, accelerating the pace of our research.

Dr. Russel Jones,
Lead Investigator Van Andel Institute

We really were pleasantly surprised because this tool [El-MAVEN] is really useful in fast analysis of tracer data. It allows us to really look at a broad set of targets so you are not limited anymore for data analysis. A data analyst of mine stepped up to me and said, "I can do now in 3 hours what used to take 4 days.

Bart Ghesquière,
Head of Metabolomics Core Facility @VIB

We were looking for public data on a tight deadline to make decisions on our back up targets for solid tumors. Elucidata was able to understand our relevance criteria, identify, and deliver high-quality harmonized data ahead of schedule. We are really happy with their deliveries and this partnership.

Ming 'Tommy' Tang,
Director of Computational Biology,
Immunitas Therapeutics